Coupling Coarse-Grained to Fine-Grained Models via Hamiltonian Replica Exchange

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چکیده

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ژورنال

عنوان ژورنال: Journal of Chemical Theory and Computation

سال: 2020

ISSN: 1549-9618,1549-9626

DOI: 10.1021/acs.jctc.0c00429